ARETE Project


Now concluded project developing and applying novel bioinformatics tools to characterise lateral gene transfer of antimicrobial resistance genes across environmental and agri-food contexts.

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Characterising Lateral Transfer of Antimicrobial Resistance?


Try the ARETE workflow!

Project Outcomes


CARD Resistomes with plasmids & genomic islands

Addition of plasmid and genomic island annotations to the CARD Resistomes dataset.
Data available here.

ARETE Pipeline Development

Development of a nextflow pipeline consolidating new and improved methods: available here

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Interested in applying for a position or collaboration in any of these areas? Let's talk!